Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02253 and BSU13410

See DNA alignment / Visit BSNT_02253 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:51
# Commandline: needle
#    -asequence pep-align/BSNT_02253___ykoV.1.22522.seq
#    -bsequence pep-align/BSU13410___ykoV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02253___ykoV-BSU13410___ykoV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02253___ykoV-BSU13410___ykoV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02253___ykoV
# 2: BSU13410___ykoV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     291/311 (93.6%)
# Similarity:   293/311 (94.2%)
# Gaps:          17/311 ( 5.5%)
# Score: 1494.0
# 
#
#=======================================

BSNT_02253___      1 -----------------MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRS     33
                                      |||||||||||||||||||||||||||||||||
BSU13410___yk      1 MNRTPSLHTKEKKGFIDMHTMWKGSISFGLVNIPIKLYAATEDKDIKLRS     50

BSNT_02253___     34 LHKEDHAPIKYEKVCTNCEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLK     83
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13410___yk     51 LHKEDHAPIKYEKVCTNCEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLK    100

BSNT_02253___     84 QEHEEKAVEIVDFVQLQEIDPIYFNRSYFVGPGDNGTKAYTLLREALRST    133
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13410___yk    101 QEHEEKAVEIVDFVQLQEIDPIYFNRSYFVGPGDNGTKAYTLLREALRST    150

BSNT_02253___    134 GKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAHVPGVPDQS    183
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU13410___yk    151 GKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAQVPGVPDQS    200

BSNT_02253___    184 NVNDKELQTAITLIDELTAEFEPEKYEDTYRQALLQRVNDKLENKETAVT    233
                     |||||||||||||||||||:||||||||||||||||||||||||||||||
BSU13410___yk    201 NVNDKELQTAITLIDELTAKFEPEKYEDTYRQALLQRVNDKLENKETAVT    250

BSNT_02253___    234 PDKAPPREDVIDLVSALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKR    283
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BSU13410___yk    251 PDKAPPREDVIDLVSALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKQ    300

BSNT_02253___    284 KTTRKKASGTS    294
                     |||||||||||
BSU13410___yk    301 KTTRKKASGTS    311


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