Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02204 and BSU13110

See DNA alignment / Visit BSNT_02204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:45
# Commandline: needle
#    -asequence pep-align/BSNT_02204___purU.1.22522.seq
#    -bsequence pep-align/BSU13110___ykkE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02204___purU-BSU13110___ykkE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02204___purU-BSU13110___ykkE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02204___purU
# 2: BSU13110___ykkE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     298/300 (99.3%)
# Similarity:   299/300 (99.7%)
# Gaps:           0/300 ( 0.0%)
# Score: 1542.0
# 
#
#=======================================

BSNT_02204___      1 MKSYMTQRLDEYRDGNEDKGRLLVSCPDQPGIVSAVSAFLFEHDANIIES     50
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13110___yk      1 MKSYMTQRLDEYRDGNEDKGRLLVSCPDQPGIVSAVSAFLFEHGANIIES     50

BSNT_02204___     51 NQYTTDPEGGRFFLRIEFDCAGIREKKASLQAAFASVAEKFDMTWSLTLA    100
                     |||||||||||||||||||||||||||:||||||||||||||||||||||
BSU13110___yk     51 NQYTTDPEGGRFFLRIEFDCAGIREKKSSLQAAFASVAEKFDMTWSLTLA    100

BSNT_02204___    101 SELKRVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEEARELVERL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13110___yk    101 SELKRVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEEARELVERL    150

BSNT_02204___    151 NIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFVSAH    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13110___yk    151 NIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFVSAH    200

BSNT_02204___    201 PNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13110___yk    201 PNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE    250

BSNT_02204___    251 QDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLEDRVIVHENKTIVFN    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13110___yk    251 QDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLEDRVIVHENKTIVFN    300


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