Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02193 and BSU13020

See DNA alignment / Visit BSNT_02193 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:44
# Commandline: needle
#    -asequence pep-align/BSNT_02193.1.22522.seq
#    -bsequence pep-align/BSU13020___ykgA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02193-BSU13020___ykgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02193-BSU13020___ykgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02193
# 2: BSU13020___ykgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     153/286 (53.5%)
# Similarity:   154/286 (53.8%)
# Gaps:         129/286 (45.1%)
# Score: 774.0
# 
#
#=======================================

BSNT_02193         0 --------------------------------------------------      0
                                                                       
BSU13020___yk      1 MDVSIPKSQHKTVCRTEYGTLQKVILCKPEHMTIKDVINETQKHFEDDNI     50

BSNT_02193         0 --------------------------------------------------      0
                                                                       
BSU13020___yk     51 HVKTANDQHSRLVEALRSHNVEVVLLPVRDGLPEQVFTRDIGFVIGEKAF    100

BSNT_02193         1 -----------------------------MLDTSIEGGDVIIDDDIVYVG     21
                                                  |||||||||||||||||||||
BSU13020___yk    101 LSSMTEPIRQGEEAVIKDFFHSQGISYTRMLDTSIEGGDVIIDDDIVYVG    150

BSNT_02193        22 ISQRTVISAIGQLEEALPEYTIVPVKLHEKFLHLDCVFNIVSESEALIYP     71
                     |||||.||||||||||||||||||||||||||||||||||:||||||||.
BSU13020___yk    151 ISQRTDISAIGQLEEALPEYTIVPVKLHEKFLHLDCVFNIISESEALIYS    200

BSNT_02193        72 QAIEPDAADMLAKRYDLIEVPEDEQFTLGTNVLSIEKKTIISLPGNRHVN    121
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU13020___yk    201 QAIEPDAADMLAKRYDLIEVPEDEQFTLGTNVLSIGKKTIISLPGNRHVN    250

BSNT_02193       122 QQLSKRGYHIIEIDLSEIIKSGGSFRCCTMPLIRGE    157
                     ||||||||||||||||||||||||||||||||||||
BSU13020___yk    251 QQLSKRGYHIIEIDLSEIIKSGGSFRCCTMPLIRGE    286


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