Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02189 and BSU12990

See DNA alignment / Visit BSNT_02189 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:44
# Commandline: needle
#    -asequence pep-align/BSNT_02189___ykfC.1.22522.seq
#    -bsequence pep-align/BSU12990___ykfC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02189___ykfC-BSU12990___ykfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02189___ykfC-BSU12990___ykfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02189___ykfC
# 2: BSU12990___ykfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     280/296 (94.6%)
# Similarity:   288/296 (97.3%)
# Gaps:           0/296 ( 0.0%)
# Score: 1480.0
# 
#
#=======================================

BSNT_02189___      1 MMHTVISAVANIWTAPDSPRPSDQFMLQPTVMIRDWLERMTYDERLGLCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12990___yk      1 MMHTVISAVANIWTAPDSPRPSDQFMLQPTVMIRDWLERMTYDERLGLCT     50

BSNT_02189___     51 DNVIQTQVLFGEKVLVTAEQEEWVSVIVPSQPSRKDPRGYPGWMKKNQLA    100
                     ||||||||||||||||||||.|||||||||||||||||||||||||.||.
BSU12990___yk     51 DNVIQTQVLFGEKVLVTAEQGEWVSVIVPSQPSRKDPRGYPGWMKKYQLE    100

BSNT_02189___    101 KSMPIHSQHDVMISKPAAFLYKSNEEKEIELSFLTVLPLIAEENGYFKVS    150
                     |:.|||:||||||||||||||:||.||||||||||||||||:||||||||
BSU12990___yk    101 KTKPIHTQHDVMISKPAAFLYRSNGEKEIELSFLTVLPLIAKENGYFKVS    150

BSNT_02189___    151 TVLGDRFVKQSDAVPVSKQKGTAEDIIQTGAFFLGLPYLWGGISGFGFDC    200
                     ||.|:|||:||||||||:||||||||||||||||||||||||||||||||
BSU12990___yk    151 TVFGERFVRQSDAVPVSQQKGTAEDIIQTGAFFLGLPYLWGGISGFGFDC    200

BSNT_02189___    201 SGFMYSIFKANGYSIPRDAGDQAKAGKGVPLDDMKAGDLLFFAYEEGKGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12990___yk    201 SGFMYSIFKANGYSIPRDAGDQAKAGKGVPLDDMKAGDLLFFAYEEGKGA    250

BSNT_02189___    251 IHHVGLYVGGGKMLHSPKTGKSIEILTLKDIIYEKELCAVRRCFSE    296
                     ||||||||||||||||||||||||||||.:.|||||||||||||||
BSU12990___yk    251 IHHVGLYVGGGKMLHSPKTGKSIEILTLTETIYEKELCAVRRCFSE    296


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