Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02162 and BSU12770

See DNA alignment / Visit BSNT_02162 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:39
# Commandline: needle
#    -asequence pep-align/BSNT_02162___xkdX.1.22522.seq
#    -bsequence pep-align/BSU12770___xkdX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02162___xkdX-BSU12770___xkdX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02162___xkdX-BSU12770___xkdX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02162___xkdX
# 2: BSU12770___xkdX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 54
# Identity:      51/54 (94.4%)
# Similarity:    53/54 (98.1%)
# Gaps:           0/54 ( 0.0%)
# Score: 273.0
# 
#
#=======================================

BSNT_02162___      1 MNYWVLALYYEWATADMVKQALAYKDCSIEDLAEGVNKKLITADQYKEIT     50
                     ||||||||||||||.|||||||||:||||:||||||||||||||||||||
BSU12770___xk      1 MNYWVLALYYEWATTDMVKQALAYEDCSIQDLAEGVNKKLITADQYKEIT     50

BSNT_02162___     51 GKAM     54
                     ||||
BSU12770___xk     51 GKAM     54


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.