Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02123 and BSU12540

See DNA alignment / Visit BSNT_02123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:33
# Commandline: needle
#    -asequence pep-align/BSNT_02123___xkdD.1.22522.seq
#    -bsequence pep-align/BSU12540___xkdD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02123___xkdD-BSU12540___xkdD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02123___xkdD-BSU12540___xkdD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02123___xkdD
# 2: BSU12540___xkdD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:     111/116 (95.7%)
# Similarity:   114/116 (98.3%)
# Gaps:           0/116 ( 0.0%)
# Score: 561.0
# 
#
#=======================================

BSNT_02123___      1 MKVLAKTKQAEKSPAPWRAVPCGDTKPIYIYSAYSEEEKERFPYSNGRLI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12540___xk      1 MKVLAKTKQAEKSPAPWRAVPCGDTKPIYIYSAYSEEEKERFPYSNGRLI     50

BSNT_02123___     51 AAVFDLSSYSQKSNAALMAAAPELLEASKAALDFLKGNSVHSKERIILLL    100
                     |||||||||||||||:|||||||||||||||||||||||:|||||||.||
BSU12540___xk     51 AAVFDLSSYSQKSNASLMAAAPELLEASKAALDFLKGNSIHSKERIIQLL    100

BSNT_02123___    101 EKAEASAAPKRGGKET    116
                     |||||||||||||.:|
BSU12540___xk    101 EKAEASAAPKRGGNKT    116


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