Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02111 and BSU12460

See DNA alignment / Visit BSNT_02111 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:32
# Commandline: needle
#    -asequence pep-align/BSNT_02111___xlyB.1.22522.seq
#    -bsequence pep-align/BSU12460___xlyB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02111___xlyB-BSU12460___xlyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02111___xlyB-BSU12460___xlyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02111___xlyB
# 2: BSU12460___xlyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     309/317 (97.5%)
# Similarity:   315/317 (99.4%)
# Gaps:           0/317 ( 0.0%)
# Score: 1608.0
# 
#
#=======================================

BSNT_02111___      1 MSIPVKKNLVSEAKYALKCPNAMSAEYITIHNTANDASAANEISYMIGNT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12460___xl      1 MSIPVKKNLVSEAKYALKCPNAMSAEYITIHNTANDASAANEISYMIGNT     50

BSNT_02111___     51 SSTSFHFAVDDQEVIQGLPLNRNAWHTGDGTNGPGNRKSIGVEICYSKSG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12460___xl     51 SSTSFHFAVDDQEVIQGLPLNRNAWHTGDGTNGPGNRKSIGVEICYSKSG    100

BSNT_02111___    101 GPKYEAAEALAISFVAQLLKERGWGIDRVRKHQDWNGKYCPHRILSEGRW    150
                     |||||||||||||||||||||||||||||||||||:||||||||||||||
BSU12460___xl    101 GPKYEAAEALAISFVAQLLKERGWGIDRVRKHQDWSGKYCPHRILSEGRW    150

BSNT_02111___    151 DQVKAAIEKELNGGLSAKKAAVSSSASVYHVKKGDTLSGIAASHGVSVKT    200
                     ||||||||||||||:||||||||||||.|||||||||||||||||.||||
BSU12460___xl    151 DQVKAAIEKELNGGVSAKKAAVSSSASEYHVKKGDTLSGIAASHGASVKT    200

BSNT_02111___    201 LQSINHITDPNYIKVGQVIKLPQTASASKSHAASSYPLPSGVIKVTSPLT    250
                     |||||||||||:||:|||||||||||||||||||||||||||||||||||
BSU12460___xl    201 LQSINHITDPNHIKIGQVIKLPQTASASKSHAASSYPLPSGVIKVTSPLT    250

BSNT_02111___    251 KGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSVSGLT    300
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BSU12460___xl    251 QGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSVSGLT    300

BSNT_02111___    301 ADGIYGPKTKAKLEEKL    317
                     ||||||||||||:||||
BSU12460___xl    301 ADGIYGPKTKAKMEEKL    317


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