Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02100 and BSU12400

See DNA alignment / Visit BSNT_02100 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:31
# Commandline: needle
#    -asequence pep-align/BSNT_02100___yjnA.1.22522.seq
#    -bsequence pep-align/BSU12400___yjnA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02100___yjnA-BSU12400___yjnA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02100___yjnA-BSU12400___yjnA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02100___yjnA
# 2: BSU12400___yjnA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     253/254 (99.6%)
# Similarity:   254/254 (100.0%)
# Gaps:           0/254 ( 0.0%)
# Score: 1244.0
# 
#
#=======================================

BSNT_02100___      1 MSVSIILMGLFVGALVGLTGVGGAALLTPLLIVLGINPSIAVGTDLVYNS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12400___yj      1 MSVSIILMGLFVGALVGLTGVGGAALLTPLLIVLGINPSIAVGTDLVYNS     50

BSNT_02100___     51 ITKLFGVASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12400___yj     51 ITKLFGVASHWRQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQE    100

BSNT_02100___    101 EIIKHALGYVLTLVAISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12400___yj    101 EIIKHALGYVLTLVAISIIVRLFLDRKLRPNRWQLMPLENKRALTILIGV    150

BSNT_02100___    151 VFGFIVGLTSIGSGSLFAIAMIYLFNMKASQIVGTDIAHAFLLVTAAGIL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12400___yj    151 VFGFIVGLTSIGSGSLFAIAMIYLFNMKASQIVGTDIAHAFLLVTAAGIL    200

BSNT_02100___    201 NASFGSVDYMLAANLLIGSIPGVLIGSHLSPRFSPRPLQFIMASIILVSG    250
                     ||||||||||||||||:|||||||||||||||||||||||||||||||||
BSU12400___yj    201 NASFGSVDYMLAANLLLGSIPGVLIGSHLSPRFSPRPLQFIMASIILVSG    250

BSNT_02100___    251 LKLI    254
                     ||||
BSU12400___yj    251 LKLI    254


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.