Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01952 and BSU11690

See DNA alignment / Visit BSNT_01952 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:19
# Commandline: needle
#    -asequence pep-align/BSNT_01952___thiG.1.22522.seq
#    -bsequence pep-align/BSU11690___thiG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01952___thiG-BSU11690___thiG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01952___thiG-BSU11690___thiG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01952___thiG
# 2: BSU11690___thiG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     251/256 (98.0%)
# Similarity:   252/256 (98.4%)
# Gaps:           2/256 ( 0.8%)
# Score: 1238.0
# 
#
#=======================================

BSNT_01952___      1 --MLTIGGKPFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIF     48
                       |||||||.||||||||||||||||||||||||||||||||||||||||
BSU11690___th      1 MSMLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIF     50

BSNT_01952___     49 DASQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVE     98
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BSU11690___th     51 EASQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVE    100

BSNT_01952___     99 VIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHA    148
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11690___th    101 VIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHA    150

BSNT_01952___    149 IMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELG    198
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11690___th    151 IMPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELG    200

BSNT_01952___    199 ADGVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSP    248
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11690___th    201 ADGVLLNTAVSGADDPVKMARAMKLAVEAGRLSYEAGRIPLKQYGTASSP    250

BSNT_01952___    249 VEGLPV    254
                     .|||||
BSU11690___th    251 GEGLPV    256


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.