Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01943 and BSU11620

See DNA alignment / Visit BSNT_01943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence pep-align/BSNT_01943___yjbO.1.22522.seq
#    -bsequence pep-align/BSU11620___yjbO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01943___yjbO-BSU11620___yjbO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01943___yjbO-BSU11620___yjbO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01943___yjbO
# 2: BSU11620___yjbO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     276/299 (92.3%)
# Similarity:   279/299 (93.3%)
# Gaps:          16/299 ( 5.4%)
# Score: 1442.0
# 
#
#=======================================

BSNT_01943___      1 MEHFFIRKNITSAEDGMTVKEYAGELGISKRLLTDIKFGGGDLQINGEHV     50
                                     ||||||||||||||||||||||||||||||||||
BSU11620___yj      1 ----------------MTVKEYAGELGISKRLLTDIKFGGGDLQINGEHV     34

BSNT_01943___     51 TVKYVLKEGDLLIVKFPEEQVSETLLAEPIPLDILYEDEHVLVINKQPYV    100
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
BSU11620___yj     35 TVKYVLKEGDLLIVKFPEEQVSETLLAEPVPLDILYEDEHVLVINKQPYV     84

BSNT_01943___    101 SSIPSREHPSGSIANGIIDHYQKNGVRATVHLVTRLDRDTSGVMLVAKHR    150
                     ||||||||||||||||||||||..||||||||||||||||||:|||||||
BSU11620___yj     85 SSIPSREHPSGSIANGIIDHYQTTGVRATVHLVTRLDRDTSGIMLVAKHR    134

BSNT_01943___    151 FAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAPIGRHPDSIIERTV    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11620___yj    135 FAHSILSSAQKNGLVKRRYAAVVHGRMAQMEGTVDAPIGRHPDSIIERTV    184

BSNT_01943___    201 TPDGQKAVTHFYVTCANDDMTSVALQLETGRTHQIRVHMSYLGHPLCGDT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11620___yj    185 TPDGQKAVTHFYVTCANDDMTSVALQLETGRTHQIRVHMSYLGHPLCGDT    234

BSNT_01943___    251 LYGGTRQEIGRQALHSEHLSFIHPLTQKNMTFHAPLPQDMRKLIKGENH    299
                     |||||||||||||||||||||||||||:||.|||||||||.||||||||
BSU11620___yj    235 LYGGTRQEIGRQALHSEHLSFIHPLTQENMRFHAPLPQDMSKLIKGENH    283


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