Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01940 and BSU11590

See DNA alignment / Visit BSNT_01940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence pep-align/BSNT_01940___yjbL.1.22522.seq
#    -bsequence pep-align/BSU11590___yjbL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01940___yjbL-BSU11590___yjbL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01940___yjbL-BSU11590___yjbL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01940___yjbL
# 2: BSU11590___yjbL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 122
# Identity:     120/122 (98.4%)
# Similarity:   120/122 (98.4%)
# Gaps:           0/122 ( 0.0%)
# Score: 614.0
# 
#
#=======================================

BSNT_01940___      1 MQNRIEILNATLSDDQLRLTCQTEGNEAERKPSGQMLVDSDHFAFVYILE     50
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU11590___yj      1 MQNRIEILNATLSDDQLRLACQTEGNEAERKPSGQMLVDSDHFAFVYILE     50

BSNT_01940___     51 LADSFEYVIIKEHVWPELKQAHAQKIPVVLEAGDQTIELAGLHEELEYLL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11590___yj     51 LADSFEYVIIKEHVWPELKQAHAQKIPVVLEAGDQTIELAGLHEELEYLL    100

BSNT_01940___    101 ENIKDNANYGEEMEEKVKHVFL    122
                     ||||||||||||||||||.|||
BSU11590___yj    101 ENIKDNANYGEEMEEKVKRVFL    122


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.