Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01916 and BSU11450

See DNA alignment / Visit BSNT_01916 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:15
# Commandline: needle
#    -asequence pep-align/BSNT_01916___oppC.1.22522.seq
#    -bsequence pep-align/BSU11450___oppC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01916___oppC-BSU11450___oppC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01916___oppC-BSU11450___oppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01916___oppC
# 2: BSU11450___oppC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     305/305 (100.0%)
# Similarity:   305/305 (100.0%)
# Gaps:           0/305 ( 0.0%)
# Score: 1557.0
# 
#
#=======================================

BSNT_01916___      1 MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIII     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op      1 MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIII     50

BSNT_01916___     51 VLIILMAIFAPMFSRYDYSTTNLLNADKPPSKDHWFGTDDLGRDIFVRTW    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op     51 VLIILMAIFAPMFSRYDYSTTNLLNADKPPSKDHWFGTDDLGRDIFVRTW    100

BSNT_01916___    101 VGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op    101 VGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVP    150

BSNT_01916___    151 SLLMVILLMVVLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op    151 SLLMVILLMVVLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLA    200

BSNT_01916___    201 SQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEAFLSYLGLGVP    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op    201 SQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEAFLSYLGLGVP    250

BSNT_01916___    251 APLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALD    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11450___op    251 APLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALD    300

BSNT_01916___    301 PKLRK    305
                     |||||
BSU11450___op    301 PKLRK    305


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.