Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01778 and BSU10490

See DNA alignment / Visit BSNT_01778 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:56
# Commandline: needle
#    -asequence pep-align/BSNT_01778___sipV.1.22522.seq
#    -bsequence pep-align/BSU10490___sipV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01778___sipV-BSU10490___sipV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01778___sipV-BSU10490___sipV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01778___sipV
# 2: BSU10490___sipV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     168/168 (100.0%)
# Similarity:   168/168 (100.0%)
# Gaps:           0/168 ( 0.0%)
# Score: 869.0
# 
#
#=======================================

BSNT_01778___      1 MKKRFWFLAGVVSVVLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNKF     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10490___si      1 MKKRFWFLAGVVSVVLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNKF     50

BSNT_01778___     51 SHRFKTIHRFDIVLFKGPDHKVLIKRVIGLPGETIKYKDDQLYVNGKQVA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10490___si     51 SHRFKTIHRFDIVLFKGPDHKVLIKRVIGLPGETIKYKDDQLYVNGKQVA    100

BSNT_01778___    101 EPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFDSR    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10490___si    101 EPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVVGDNRIYSFDSR    150

BSNT_01778___    151 HFGPIREKNIVGVISDAE    168
                     ||||||||||||||||||
BSU10490___si    151 HFGPIREKNIVGVISDAE    168


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