Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01722 and BSU10090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:49
# Commandline: needle
# -asequence pep-align/BSNT_01722___yhgB.1.22522.seq
# -bsequence pep-align/BSU10090___yhgB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01722___yhgB-BSU10090___yhgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01722___yhgB-BSU10090___yhgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01722___yhgB
# 2: BSU10090___yhgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity: 68/123 (55.3%)
# Similarity: 73/123 (59.3%)
# Gaps: 37/123 (30.1%)
# Score: 324.0
#
#
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BSNT_01722___ 1 MKHTCPVCGFKGLAEPPYDHEGNH------------------SHEICPCC 32
||||||||||| |....| |..:...|
BSU10090___yh 1 MKHTCPVCGFK-------DWLNRHMIMKAIILMKSARAAVFSSDLMSTRC 43
BSNT_01722___ 33 GFQFGFDDYEMQHEDDSYLEPSESIIAYRKNWLAEGCVIFSPECFPKHLQ 82
..:. :::|||||||||||||||||||||||||||||||
BSU10090___yh 44 STRI------------THIEPSESIIAYRKNWLAEGCVIFSPECFPKHLQ 81
BSNT_01722___ 83 KANRVLRHHLIEQLKQINVHLPS 105
||||.||||||||||||||||||
BSU10090___yh 82 KANRGLRHHLIEQLKQINVHLPS 104
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