Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01687 and BSU09880

See DNA alignment / Visit BSNT_01687 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:45
# Commandline: needle
#    -asequence pep-align/BSNT_01687___yhaR.1.22522.seq
#    -bsequence pep-align/BSU09880___yhaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01687___yhaR-BSU09880___yhaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01687___yhaR-BSU09880___yhaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01687___yhaR
# 2: BSU09880___yhaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     253/271 (93.4%)
# Similarity:   254/271 (93.7%)
# Gaps:          16/271 ( 5.9%)
# Score: 1257.0
# 
#
#=======================================

BSNT_01687___      1 MYRRKKKESVYLEVLHMEFVQYACNGAVAEIILNRPDAHHALNEQLLSEL     50
                                     |||||||||||||||||||||||||||||:||||
BSU09880___yh      1 ----------------MEFVQYACNGAVAEIILNRPDAHHALNEQMLSEL     34

BSNT_01687___     51 KEAVEMAAASEALIVLLRGSGKGFSAGGDIRMMTSEHDPDQFKRLMDTIE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh     35 KEAVEMAAASEALIVLLRGSGKGFSAGGDIRMMTSEHDPDQFKRLMDTIE     84

BSNT_01687___    101 AVTLNLYQMKKVTIAAIHGAAAGLGLSLALCADIVLAEKNAVLAMNFIGI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh     85 AVTLNLYQMKKVTIAAIHGAAAGLGLSLALCADIVLAEKNAVLAMNFIGI    134

BSNT_01687___    151 GLVPDGGGHYLLKKRIGEAKAKKLIWSGKKLSASEAADMGLLDGTFAGDP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09880___yh    135 GLVPDGGGHYLLKKRIGEAKAKKLIWSGKKLSASEAADMGLLDGTFAGDP    184

BSNT_01687___    201 AEGARPIIETLLASPLLAMIETKAIFQSLQIEELKKVLSLERSAQERMRR    250
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU09880___yh    185 AEGARPIIETLLASPLLAMIETKGIFQSLQIEELKKVLSLERSAQERMRR    234

BSNT_01687___    251 TKDHQEGIRAFLEKREPKFQA    271
                     |||||||||||||||||||||
BSU09880___yh    235 TKDHQEGIRAFLEKREPKFQA    255


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