Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01644 and BSU09570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:40
# Commandline: needle
# -asequence pep-align/BSNT_01644.1.22522.seq
# -bsequence pep-align/BSU09570___yhdR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01644-BSU09570___yhdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01644-BSU09570___yhdR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01644
# 2: BSU09570___yhdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 243/393 (61.8%)
# Similarity: 244/393 (62.1%)
# Gaps: 149/393 (37.9%)
# Score: 1243.0
#
#
#=======================================
BSNT_01644 0 -------------------------------------------------- 0
BSU09570___yh 1 MKLAGLSREVEENLNKGSWIRKLFDEGARLKKEFGEDQVFDFSLGNPIVE 50
BSNT_01644 0 -------------------------------------------------- 0
BSU09570___yh 51 PPEAFKRALIEEAEKGSHGYIQNQGLLAAREKVAQFLGSRFEADFSAERI 100
BSNT_01644 1 -------------------------------------------------M 1
:
BSU09570___yh 101 VMTVGAGGALNVALKSIVNPGEEVIILAPYFAEYKLYIENYGGKAVSCPL 150
BSNT_01644 2 TSRFEIDIEAVRQSITPQTKGLILNTPHNPTGTVLSQKNIDDLGALLKEI 51
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09570___yh 151 TSRFEIDIEAVRQSITPQTKGLILNTPHNPTGTVLSQKNIDDLGALLKEI 200
BSNT_01644 52 EEKSGQTIYVLFDEPYSQLIYDEELANPFQSYHRVILASSFSKDLGIAGE 101
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09570___yh 201 EEKSGQTIYVLFDEPYSQLIYDEELANPFQSYHRVILASSFSKDLGIAGE 250
BSNT_01644 102 RLGYIGLDSRMPDADLLINAFVYCNRTLGFVNAPVMMQRAVARMDDLRVD 151
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09570___yh 251 RLGYIGLDSRMPDADLLINAFVYCNRTLGFVNAPVMMQRAVARMDDLRVD 300
BSNT_01644 152 ASAYKERRDLMVDILKEAGFEFEMPKGGFFVFPKSPIEDEVAFCVHAAQK 201
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09570___yh 301 ASAYKERRDLMVDILKEAGFEFEMPKGGFFVFPKSPIEDEVAFCVHAAQK 350
BSNT_01644 202 YKLLIVPSSGFGMSGHFRLSFSVPIEQIKNSRDIFISLYKDFA 244
|||||||||||||||||||||||||||||||||||||||||||
BSU09570___yh 351 YKLLIVPSSGFGMSGHFRLSFSVPIEQIKNSRDIFISLYKDFA 393
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