Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01642 and BSU09560

See DNA alignment / Visit BSNT_01642 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:40
# Commandline: needle
#    -asequence pep-align/BSNT_01642.1.22522.seq
#    -bsequence pep-align/BSU09560___cueR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01642-BSU09560___cueR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01642-BSU09560___cueR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01642
# 2: BSU09560___cueR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:     143/181 (79.0%)
# Similarity:   143/181 (79.0%)
# Gaps:          38/181 (21.0%)
# Score: 726.0
# 
#
#=======================================

BSNT_01642         1 MLLQSDDEFHNFQFRSEKNNKLVQDTVHILNYSHNYNVMVGRDIDGAETY     50
                                                           ||||||||||||
BSU09560___cu      1 --------------------------------------MVGRDIDGAETY     12

BSNT_01642        51 RISELAALAGVTKRTVDYYTNLGLLTPARSCSNYRYYDENALKRLIFIVD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu     13 RISELAALAGVTKRTVDYYTNLGLLTPARSCSNYRYYDENALKRLIFIVD     62

BSNT_01642       101 CKKQRLALSDIKDRLENQFPSSAKLDDEIGNLALEIDHMNQNISGILHRF    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09560___cu     63 CKKQRLALSDIKDRLENQFPSSAKLDDEIGNLALEIDHMNQNISGILHRF    112

BSNT_01642       151 ERLKPEDRDKLKSKLPPEKLAVFQSFMLLLS    181
                     |||||||||||||||||||||||||||||||
BSU09560___cu    113 ERLKPEDRDKLKSKLPPEKLAVFQSFMLLLS    143


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