Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01501 and BSU08830

See DNA alignment / Visit BSNT_01501 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:26
# Commandline: needle
#    -asequence pep-align/BSNT_01501___ssuB.1.22522.seq
#    -bsequence pep-align/BSU08830___ssuB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01501___ssuB-BSU08830___ssuB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01501___ssuB-BSU08830___ssuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01501___ssuB
# 2: BSU08830___ssuB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     253/255 (99.2%)
# Similarity:   254/255 (99.6%)
# Gaps:           0/255 ( 0.0%)
# Score: 1280.0
# 
#
#=======================================

BSNT_01501___      1 MAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLK     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08830___ss      1 MAVTISIKEKAFVQEGRKNTVLENIELSIAPGEFLTLIGPSGCGKSTLLK     50

BSNT_01501___     51 IIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNIAADL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08830___ss     51 IIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNIAADL    100

BSNT_01501___    101 NLNDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPE    150
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU08830___ss    101 NLKDPKVKQKVDELIEIVRLKGSEKAYPRELSGGMSQRVAIARALLREPE    150

BSNT_01501___    151 VLLLDEPFGALDAFTRKHLQDVLLDIWRRKKTTMILVTHDIDESVYLGNE    200
                     ||||||||||||||||||||||||||||:|||||||||||||||||||||
BSU08830___ss    151 VLLLDEPFGALDAFTRKHLQDVLLDIWRKKKTTMILVTHDIDESVYLGNE    200

BSNT_01501___    201 LAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSEFEKTEDLEYA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08830___ss    201 LAILKAKPGKIHKLMPIHLAYPRNRTTPDFQAIRQRVLSEFEKTEDLEYA    250

BSNT_01501___    251 EGSGI    255
                     |||||
BSU08830___ss    251 EGSGI    255


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