Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01439 and BSU08670

See DNA alignment / Visit BSNT_01439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:23
# Commandline: needle
#    -asequence pep-align/BSNT_01439.1.22522.seq
#    -bsequence pep-align/BSU08670___ygaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01439-BSU08670___ygaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01439-BSU08670___ygaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01439
# 2: BSU08670___ygaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     103/114 (90.4%)
# Similarity:   103/114 (90.4%)
# Gaps:          11/114 ( 9.6%)
# Score: 513.0
# 
#
#=======================================

BSNT_01439         1 -----------MIKGGNVYTFIRLKEEPMTEFEKLVSEQMKTMDKLLDLQ     39
                                |||||||||||||||||||||||||||||||||||||||
BSU08670___yg      1 MSQRVCFMEIEMIKGGNVYTFIRLKEEPMTEFEKLVSEQMKTMDKLLDLQ     50

BSNT_01439        40 SELDRCKQIEAELRHLERDARLRGIQAEIAVKRKHLADIQDMFQKQTEQV     89
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg     51 SELDRCKQIEAELRHLERDARLRGIQAEIAVKRKHLADIQDMFQKQTEQV    100

BSNT_01439        90 IRSYRSSEKPSSFV    103
                     ||||||||||||||
BSU08670___yg    101 IRSYRSSEKPSSFV    114


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