Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01332 and BSU07980

See DNA alignment / Visit BSNT_01332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:09
# Commandline: needle
#    -asequence pep-align/BSNT_01332___yfjS.1.22522.seq
#    -bsequence pep-align/BSU07980___pdaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01332___yfjS-BSU07980___pdaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01332___yfjS-BSU07980___pdaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01332___yfjS
# 2: BSU07980___pdaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     261/263 (99.2%)
# Similarity:   263/263 (100.0%)
# Gaps:           0/263 ( 0.0%)
# Score: 1405.0
# 
#
#=======================================

BSNT_01332___      1 MKWMCSICCAAVLLAGGAAQAEAVPNEPINWGFKRSVNHQPPDAGKQLNS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd      1 MKWMCSICCAAVLLAGGAAQAEAVPNEPINWGFKRSVNHQPPDAGKQLNS     50

BSNT_01332___     51 LIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd     51 LIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVT    100

BSNT_01332___    101 GHFVKDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    101 GHFVKDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEV    150

BSNT_01332___    151 YKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQK    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    151 YKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQK    200

BSNT_01332___    201 GKKYAYDHMIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSID    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    201 GKKYAYDHMIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSID    250

BSNT_01332___    251 DLMFEKEMKMPSL    263
                     ||||||||::|||
BSU07980___pd    251 DLMFEKEMRLPSL    263


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