Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01303 and BSU07820

See DNA alignment / Visit BSNT_01303 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:05
# Commandline: needle
#    -asequence pep-align/BSNT_01303___treR.1.22522.seq
#    -bsequence pep-align/BSU07820___treR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01303___treR-BSU07820___treR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01303___treR-BSU07820___treR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01303___treR
# 2: BSU07820___treR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity:     238/238 (100.0%)
# Similarity:   238/238 (100.0%)
# Gaps:           0/238 ( 0.0%)
# Score: 1234.0
# 
#
#=======================================

BSNT_01303___      1 MKVNKFITIYKDIAQQIEGGRWKAEEILPSEHELTAQYGTSRETVRKALH     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07820___tr      1 MKVNKFITIYKDIAQQIEGGRWKAEEILPSEHELTAQYGTSRETVRKALH     50

BSNT_01303___     51 MLAQNGYIQKIRGKGSVVLNREKMQFPVSGLVSFKELAQTLGKETKTTVH    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07820___tr     51 MLAQNGYIQKIRGKGSVVLNREKMQFPVSGLVSFKELAQTLGKETKTTVH    100

BSNT_01303___    101 KFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07820___tr    101 KFGLEPPSELIQKQLRANLDDDIWEVIRSRKIDGEHVILDKDYFFRKHVP    150

BSNT_01303___    151 HLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYDH    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07820___tr    151 HLTKEICENSIYEYIEGELGLSISYAQKEIVAEPCTDEDRELLDLRGYDH    200

BSNT_01303___    201 MVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK    238
                     ||||||||||||||||||||||||||||||||||||||
BSU07820___tr    201 MVVVRNYVFLEDTSLFQYTESRHRLDKFRFVDFARRGK    238


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.