Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01152 and BSU06730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:48
# Commandline: needle
# -asequence pep-align/BSNT_01152.1.22522.seq
# -bsequence pep-align/BSU06730___yefA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01152-BSU06730___yefA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01152-BSU06730___yefA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01152
# 2: BSU06730___yefA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 503
# Identity: 237/503 (47.1%)
# Similarity: 251/503 (49.9%)
# Gaps: 209/503 (41.6%)
# Score: 1171.5
#
#
#=======================================
BSNT_01152 1 MKMKPPVEKNEYYDVTFEDLTHEGAGVAKVQGFPIFVPNALPEEKAQIKV 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06730___ye 1 MKMKPPVEKNEYYDVTFEDLTHEGAGVAKVQGFPIFVPNALPEEKAQIKV 50
BSNT_01152 51 TRVKKGFAFGRLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFK 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06730___ye 51 TRVKKGFAFGRLIELKEESPHRTDAPCPIYKQCGGCQLQHMTYEGQLLFK 100
BSNT_01152 101 QKQVKDVLERIGKLDLSNVTVHPTLGMEDPWNYRNKAQVPVGEREGGLVA 150
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU06730___ye 101 QKQVKDVLERIGKLDLSKVTVHPTLGMEDPWNYRNKAQVPVGEREGGLVA 150
BSNT_01152 151 GFYQQRSHDIIEMSACLIQQSKNDEAVQAVKDICAKYGVKAYNEERHKGW 200
|||||||||||:|||||||||||||||||||||||.||||||||||||||
BSU06730___ye 151 GFYQQRSHDIIDMSACLIQQSKNDEAVQAVKDICANYGVKAYNEERHKGW 200
BSNT_01152 201 LRHIMVRYGVVTGEMMIVFITRTNDFPHKRRSSKTSQRNSRTSNPSCKTS 250
|||||||||||||||||||||||:|||||.:
BSU06730___ye 201 LRHIMVRYGVVTGEMMIVFITRTSDFPHKAK------------------- 231
BSNT_01152 251 TRTKQTSSSGTKQTSSGAKNTSTTSSETSNSPFPPDRSIRSTRSRQRCST 300
..|...:.||..:||....:..:.:.
BSU06730___ye 232 ------------------------IIEDITAQFPHVKSIVQNINPNKTNV 257
BSNT_01152 301 TKRLSTLSFKGKKPSLTPTAASARFLSSWRS----RRKKCTV-------- 338
.....|....|:: .:.......:|..|.|| ..::..|
BSU06730___ye 258 IFGNETNVIWGEE-YIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEY 306
BSNT_01152 338 -------------------------------------------------- 338
BSU06730___ye 307 AELQGEETVIDAYCGIGTISLFLAKQAKKVYGVEIVPEAIEDAKRNAELN 356
BSNT_01152 338 -------------------------------------------------- 338
BSU06730___ye 357 GNTNAEFAVGEAETVIPKWYEEGITADTLVVDPPRKGCDEALLRTIVEMK 406
BSNT_01152 338 -------------------------------------------------- 338
BSU06730___ye 407 PKRVVYVSCNPGTLARDLRVLEDGGYVTREVQPVDMFPHTNHVECCVLIK 456
BSNT_01152 338 --- 338
BSU06730___ye 457 LKE 459
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