Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01083 and BSU06310

See DNA alignment / Visit BSNT_01083 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:37
# Commandline: needle
#    -asequence pep-align/BSNT_01083___gabP.1.22522.seq
#    -bsequence pep-align/BSU06310___gabP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01083___gabP-BSU06310___gabP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01083___gabP-BSU06310___gabP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01083___gabP
# 2: BSU06310___gabP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 469
# Identity:     468/469 (99.8%)
# Similarity:   469/469 (100.0%)
# Gaps:           0/469 ( 0.0%)
# Score: 2353.0
# 
#
#=======================================

BSNT_01083___      1 MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPGAVVSYA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga      1 MNQSQSGLKKELKTRHMTMISIAGVIGAGLFVGSGSVIHSTGPGAVVSYA     50

BSNT_01083___     51 LAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGWLYWFFW    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga     51 LAGLLVIFIMRMLGEMSAVNPTSGSFSQYAHDAIGPWAGFTIGWLYWFFW    100

BSNT_01083___    101 VIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVKSFGEFE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    101 VIVIAIEAIAGAGIIQYWFHDIPLWLTSLILTIVLTLTNVYSVKSFGEFE    150

BSNT_01083___    151 YWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFFPEGISS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    151 YWFSLIKVVTIIAFLIVGFAFIFGFAPGSEPVGFSNLTGKGGFFPEGISS    200

BSNT_01083___    201 VLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRIIVFYVGS    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    201 VLLGIVVVIFSFMGTEIVAIAAGETSNPIESVTKATRSVVWRIIVFYVGS    250

BSNT_01083___    251 IAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAVLSCLNS    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    251 IAIVVALLPWNSANILESPFVAVLEHIGVPAAAQIMNFIVLTAVLSCLNS    300

BSNT_01083___    301 GLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYIAVVMNY    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    301 GLYTTSRMLYSLAERNEAPRRFMKLSKKGVPVQAIVAGTFFSYIAVVMNY    350

BSNT_01083___    351 FSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEALKIKMWL    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    351 FSPDTVFLFLVNSSGAIALLVYLVIAVSQLKMRKKLEKTNPEALKIKMWL    400

BSNT_01083___    401 FPFLTYLTILAICGILVSMAFIDSMRDELLLTGVITGIVLISYLVFRKRK    450
                     |||||||||:||||||||||||||||||||||||||||||||||||||||
BSU06310___ga    401 FPFLTYLTIIAICGILVSMAFIDSMRDELLLTGVITGIVLISYLVFRKRK    450

BSNT_01083___    451 VSEKAAANPVTQQQPDILP    469
                     |||||||||||||||||||
BSU06310___ga    451 VSEKAAANPVTQQQPDILP    469


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