Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01010 and BSU05860

See DNA alignment / Visit BSNT_01010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:31
# Commandline: needle
#    -asequence pep-align/BSNT_01010___ydhR.1.22522.seq
#    -bsequence pep-align/BSU05860___gmuE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01010___ydhR-BSU05860___gmuE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01010___ydhR-BSU05860___gmuE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01010___ydhR
# 2: BSU05860___gmuE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     290/299 (97.0%)
# Similarity:   293/299 (98.0%)
# Gaps:           0/299 ( 0.0%)
# Score: 1518.0
# 
#
#=======================================

BSNT_01010___      1 MLGGIEAGGTKVICAVGKEDGTIIDRIEFPTKMPDETIEKVIQYFRQFSL     50
                     |||||||||||.:||||:|||||||||||||||||||||||||||.||||
BSU05860___gm      1 MLGGIEAGGTKFVCAVGREDGTIIDRIEFPTKMPDETIEKVIQYFSQFSL     50

BSNT_01010___     51 QAIGIGSFGPVDNDKTSQTYGTIMATPKAGWRHYPFLQTVKNEMKIPVGF    100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU05860___gm     51 QAIGIGSFGPVDNDKTSQTYGTITATPKAGWRHYPFLQTVKNEMKIPVGF    100

BSNT_01010___    101 STDVNAAALGEFLFGEAKGLDSCLYITIGTGIGAGAIVGGRLLQGLSHPE    150
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05860___gm    101 STDVNAAALGEFLFGEAKGLDSCLYITIGTGIGAGAIVEGRLLQGLSHPE    150

BSNT_01010___    151 MGHIYIRRHPDDAYQGKCPYHGDCFEGLASGPAIEARWGKKAADLSGIAQ    200
                     ||||||||||||.|||||||||||||||||||||||||||||||||.|||
BSU05860___gm    151 MGHIYIRRHPDDVYQGKCPYHGDCFEGLASGPAIEARWGKKAADLSDIAQ    200

BSNT_01010___    201 VWELEGYYIAQALAQYILILAPKKIILGGGVMQQKQVFSYIYQYVPKIMN    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05860___gm    201 VWELEGYYIAQALAQYILILAPKKIILGGGVMQQKQVFSYIYQYVPKIMN    250

BSNT_01010___    251 NYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQAEAASGEVRS    299
                     :||||||||||||||||||||||||||||||||||||||||||||||||
BSU05860___gm    251 SYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQALQAEAASGEVRS    299


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