Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00997 and BSU05790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:30
# Commandline: needle
# -asequence pep-align/BSNT_00997___ydhK.1.22522.seq
# -bsequence pep-align/BSU05790___ydhK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00997___ydhK-BSU05790___ydhK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00997___ydhK-BSU05790___ydhK.aln
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#
# Aligned_sequences: 2
# 1: BSNT_00997___ydhK
# 2: BSU05790___ydhK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 204/209 (97.6%)
# Similarity: 205/209 (98.1%)
# Gaps: 4/209 ( 1.9%)
# Score: 1060.0
#
#
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BSNT_00997___ 1 MFSLSAGKSYRKKMKQRRMNMKISKYALGILMLSLVFVLSACGNNNSTKE 50
:||||||||||||||||||||||||||||||||||||||||||||||
BSU05790___yd 1 ---MSAGKSYRKKMKQRRMNMKISKYALGILMLSLVFVLSACGNNNSTKE 47
BSNT_00997___ 51 STHDNHSDSSTHEEMDHSGSADVPEGLQESKNPKYKVGSQVIINTSHMKG 100
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BSU05790___yd 48 STHDNHSDSSTHEEMDHSGSADVPEGLQESKNPKYKVGSQVIINTSHMKG 97
BSNT_00997___ 101 MKGAEATVTGAYDTTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAGDKTLQ 150
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BSU05790___yd 98 MKGAEATVTGAYDTTAYVVSYTPTNGGQRVDHHKWVIQEEIKDAGDKTLQ 147
BSNT_00997___ 151 PGDQVILEASHMKGMKGATAEIDSAEKTTVYMVDYTSTTSGEKVKNHKWV 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05790___yd 148 PGDQVILEASHMKGMKGATAEIDSAEKTTVYMVDYTSTTSGEKVKNHKWV 197
BSNT_00997___ 201 TEDELSAKS 209
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BSU05790___yd 198 TEDELSAK- 205
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