Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00993 and BSU05770

See DNA alignment / Visit BSNT_00993 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:29
# Commandline: needle
#    -asequence pep-align/BSNT_00993___ydhI.1.22522.seq
#    -bsequence pep-align/BSU05770___ydhI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00993___ydhI-BSU05770___ydhI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00993___ydhI-BSU05770___ydhI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00993___ydhI
# 2: BSU05770___ydhI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     152/160 (95.0%)
# Similarity:   155/160 (96.9%)
# Gaps:           1/160 ( 0.6%)
# Score: 786.0
# 
#
#=======================================

BSNT_00993___      1 -MIIIPNNEIAKHMLTAFFAKHWGTPEMAISSGIFRCDELDGFAAVNESG     49
                      |||||||||||||||.|||||||||||||||||||||||||||||||||
BSU05770___yd      1 MMIIIPNNEIAKHMLTDFFAKHWGTPEMAISSGIFRCDELDGFAAVNESG     50

BSNT_00993___     50 EIIGCITYLIDGKDCEIISLDSMIQNKGIGTALLQQVEETAKHAHCQRIK     99
                     ||||||||.|||||||||||||||:||||||||||||||.||||||||||
BSU05770___yd     51 EIIGCITYTIDGKDCEIISLDSMIENKGIGTALLQQVEEKAKHAHCQRIK    100

BSNT_00993___    100 LITTNDNVHAMAFYQKRGYQFAEVFPNAVEKARRLKPEIPEVAENGILIR    149
                     ||||||||:|:|||||||||||.|||||||||||||||||||||||||||
BSU05770___yd    101 LITTNDNVNAIAFYQKRGYQFAAVFPNAVEKARRLKPEIPEVAENGILIR    150

BSNT_00993___    150 DEILFSKVID    159
                     ||||||||||
BSU05770___yd    151 DEILFSKVID    160


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.