Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00962 and BSU05550

See DNA alignment / Visit BSNT_00962 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence pep-align/BSNT_00962___cotP.1.22522.seq
#    -bsequence pep-align/BSU05550___cotP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00962___cotP-BSU05550___cotP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00962___cotP-BSU05550___cotP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00962___cotP
# 2: BSU05550___cotP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:     139/143 (97.2%)
# Similarity:   143/143 (100.0%)
# Gaps:           0/143 ( 0.0%)
# Score: 735.0
# 
#
#=======================================

BSNT_00962___      1 MDFEKIRKWLEITNEYKQSDFWTNVLKYKAPEHFFDSEASTFVYDFYQDE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05550___co      1 MDFEKIRKWLEITNEYKQSDFWTNVLKYKAPEHFFDSEASTFVYDFYQDE     50

BSNT_00962___     51 EYNFIIVEMPGVYEEELTIRLLSKTQLLIKGTITPVFPAEMEVMRERYYG    100
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BSU05550___co     51 EYNFIIVEMPGVYEEELTIRLLSKTQLLIKGTITPVFPAEMEVLRERYYG    100

BSNT_00962___    101 EIERIIQLPEAAESHLLQIQLLNGLLHISYPRQIETIAFNKGL    143
                     |||||||||||||:|||||||||||||||||||:||:||||||
BSU05550___co    101 EIERIIQLPEAAETHLLQIQLLNGLLHISYPRQVETVAFNKGL    143


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