Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00922 and BSU05360

See DNA alignment / Visit BSNT_00922 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence pep-align/BSNT_00922___ydfC.1.22522.seq
#    -bsequence pep-align/BSU05360___ydfC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00922___ydfC-BSU05360___ydfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00922___ydfC-BSU05360___ydfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00922___ydfC
# 2: BSU05360___ydfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     290/306 (94.8%)
# Similarity:   298/306 (97.4%)
# Gaps:           0/306 ( 0.0%)
# Score: 1466.0
# 
#
#=======================================

BSNT_00922___      1 MQKKTVQLITSNSLMICLWASAFPGIRAGLEGYTPEHLALFRLLIGSMAL     50
                     |:|||||::.|:||||.|||||||||||||||||||||||||||||||||
BSU05360___yd      1 MRKKTVQIMISHSLMIGLWASAFPGIRAGLEGYTPEHLALFRLLIGSMAL     50

BSNT_00922___     51 LLFAVLTQMRLPDLKDIPAIFLLGFLGFALYHILLNIGEKTVSAGVASLL    100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU05360___yd     51 LLFAVLTQMRLPDLKDIPAIFLLGFLGFAFYHILLNIGEKTVSAGVASLL    100

BSNT_00922___    101 VTTAPIFSAMLSRLFYKEHFGFTKWLGSMISLLGVLLIAFGAGDFTYSMS    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05360___yd    101 VTTAPIFSAMLSRLFYKEHFGFTKWLGSMISLLGVLLIAFGAGDFTYSMS    150

BSNT_00922___    151 GILVILLAAFSESIYFVFQARYIKKYGFIPFVTFTIWGGTIPMLVFLPGL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05360___yd    151 GILVILLAAFSESIYFVFQARYIKKYGFIPFVTFTIWGGTIPMLVFLPGL    200

BSNT_00922___    201 GEEMMNASISATLSIVYLGLLPTVIPYFALAYVTALIGASEATLSLYVTP    250
                     ||||||||||||||||||||||||||||||||||:.:|||||||||||||
BSU05360___yd    201 GEEMMNASISATLSIVYLGLLPTVIPYFALAYVTSFVGASEATLSLYVTP    250

BSNT_00922___    251 ALALVISWVWIGEIPAFLSLLGGVVTVSGVCFTYLKVNKMNKIFNTHFSA    300
                     ||||:|||:||||||..||||||||||.||||||||||||||||.|||||
BSU05360___yd    251 ALALIISWLWIGEIPTLLSLLGGVVTVGGVCFTYLKVNKMNKIFITHFSA    300

BSNT_00922___    301 KRVKKL    306
                     ||||||
BSU05360___yd    301 KRVKKL    306


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