Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00905 and BSU05230

See DNA alignment / Visit BSNT_00905 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:20
# Commandline: needle
#    -asequence pep-align/BSNT_00905___ydeK.1.22522.seq
#    -bsequence pep-align/BSU05230___ydeK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00905___ydeK-BSU05230___ydeK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00905___ydeK-BSU05230___ydeK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00905___ydeK
# 2: BSU05230___ydeK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     284/287 (99.0%)
# Similarity:   285/287 (99.3%)
# Gaps:           0/287 ( 0.0%)
# Score: 1434.0
# 
#
#=======================================

BSNT_00905___      1 MNKTTNGWINGFIGVLIFSGSLPATRLAVSDFDPLFLTVCRAAIAGVLAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05230___yd      1 MNKTTNGWINGFIGVLIFSGSLPATRLAVSDFDPLFLTVCRAAIAGVLAG     50

BSNT_00905___     51 GLLLIFRQQHPAKRDLISLLVVAFGVVIGFPLLTALALQHVTSAHAIVFI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05230___yd     51 GLLLIFRQQHPAKRDLISLLVVAFGVVIGFPLLTALALQHVTSAHAIVFI    100

BSNT_00905___    101 GLLPLATAVFGVLRGGERPRPVFWIFSTVGSLLVAGFALIQGGGSSPLGD    150
                     |||||||||||||||||||||||||||..|||||||||||||||||||||
BSU05230___yd    101 GLLPLATAVFGVLRGGERPRPVFWIFSAAGSLLVAGFALIQGGGSSPLGD    150

BSNT_00905___    151 AYMLASIVVCGLGYAEGARLSRRLGNWQVISWALVLSLPLMLPLSFFFTP    200
                     ||||||||||||||||||:|||||||||||||||||||||||||||||||
BSU05230___yd    151 AYMLASIVVCGLGYAEGAKLSRRLGNWQVISWALVLSLPLMLPLSFFFTP    200

BSNT_00905___    201 DSWSAIGVPALLSLAYVSLFSMLIGFVFWYRGLAQGGIAAVGQLQLLQPF    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05230___yd    201 DSWSAIGVPALLSLAYVSLFSMLIGFVFWYRGLAQGGIAAVGQLQLLQPF    250

BSNT_00905___    251 FGLLLASVILHEKVGWALVAVNIAVIMCVAAARRFAK    287
                     |||||||||||||||||||||||||||||||||||||
BSU05230___yd    251 FGLLLASVILHEKVGWALVAVNIAVIMCVAAARRFAK    287


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.