Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00890 and BSU05160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:19
# Commandline: needle
# -asequence pep-align/BSNT_00890.1.22522.seq
# -bsequence pep-align/BSU05160___ydeD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00890-BSU05160___ydeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00890-BSU05160___ydeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00890
# 2: BSU05160___ydeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 168/319 (52.7%)
# Similarity: 173/319 (54.2%)
# Gaps: 146/319 (45.8%)
# Score: 863.0
#
#
#=======================================
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 1 MNTSNRRMGLFYVITGATCWGIGGTVAKKLFQEYQIDVNWLVTTRLLTAG 50
BSNT_00890 0 -------------------------------------------------- 0
BSU05160___yd 51 MLLLMLQLFRKDRSQVIEVWKHKASAGQLLIFGLLGMLAVQYTYMASIQH 100
BSNT_00890 1 ----------------------------------------------MLTN 4
:|||
BSU05160___yd 101 GNAAVATLLQYLSPVIVIIYTLLRKQTVLTKQDIITVVLALVGCFFLLTN 150
BSNT_00890 5 GSISQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIG 54
||:|||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 151 GSMSQLSVPAAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIG 200
BSNT_00890 55 GFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSP 104
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05160___yd 201 GFALGFIHPPWQLDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSP 250
BSNT_00890 105 KETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALNKEP 154
||||||||||||||||||||||||||||||||||||||||||||||:|||
BSU05160___yd 251 KETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALHKEP 300
BSNT_00890 155 SVQSEKSILKIRNHANRDI 173
|::||||||||||||||||
BSU05160___yd 301 SMESEKSILKIRNHANRDI 319
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