Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00885 and BSU05130

See DNA alignment / Visit BSNT_00885 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:19
# Commandline: needle
#    -asequence pep-align/BSNT_00885___ydeB.1.22522.seq
#    -bsequence pep-align/BSU05130___ydeB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00885___ydeB-BSU05130___ydeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00885___ydeB-BSU05130___ydeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00885___ydeB
# 2: BSU05130___ydeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     153/158 (96.8%)
# Similarity:   153/158 (96.8%)
# Gaps:           5/158 ( 3.2%)
# Score: 772.0
# 
#
#=======================================

BSNT_00885___      1 MEVDDMFQIGDNIVYPMHGAGIIEAIEEKEFLEEKQQYYVIRMSISNMTV     50
                          |||||||||||||||||||||||||||||||||||||||||||||
BSU05130___yd      1 -----MFQIGDNIVYPMHGAGIIEAIEEKEFLEEKQQYYVIRMSISNMTV     45

BSNT_00885___     51 MIPTSKILSSNIRPVTDILALKHIMHIFQHGESDRLLPWKQRYKINTDKI    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05130___yd     46 MIPTSKILSSNIRPVTDILALKHIMHIFQHGESDRLLPWKQRYKINTDKI     95

BSNT_00885___    101 KTGEIQEGAEVVRDLMRMKKEKALNASEKKMLDNAYEFLISELEVIKGIT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05130___yd     96 KTGEIQEGAEVVRDLMRMKKEKALNASEKKMLDNAYEFLISELEVIKGIT    145

BSNT_00885___    151 EKQIKSFG    158
                     ||||||||
BSU05130___yd    146 EKQIKSFG    153


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.