Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00884 and BSU05120

See DNA alignment / Visit BSNT_00884 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:18
# Commandline: needle
#    -asequence pep-align/BSNT_00884___cspC.1.22522.seq
#    -bsequence pep-align/BSU05120___cspC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00884___cspC-BSU05120___cspC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00884___cspC-BSU05120___cspC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00884___cspC
# 2: BSU05120___cspC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      66/66 (100.0%)
# Similarity:    66/66 (100.0%)
# Gaps:           0/66 ( 0.0%)
# Score: 342.0
# 
#
#=======================================

BSNT_00884___      1 MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSDGFKSLDEGQKVSFD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05120___cs      1 MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSDGFKSLDEGQKVSFD     50

BSNT_00884___     51 VEQGARGAQAANVQKA     66
                     ||||||||||||||||
BSU05120___cs     51 VEQGARGAQAANVQKA     66


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.