Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00855 and BSU04960

See DNA alignment / Visit BSNT_00855 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:17
# Commandline: needle
#    -asequence pep-align/BSNT_00855.1.22522.seq
#    -bsequence pep-align/BSU04960___yddG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00855-BSU04960___yddG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00855-BSU04960___yddG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00855
# 2: BSU04960___yddG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     773/816 (94.7%)
# Similarity:   794/816 (97.3%)
# Gaps:           4/816 ( 0.5%)
# Score: 3931.0
# 
#
#=======================================

BSNT_00855         1 ---MKKKRILIVSAIVLLFLTVASAVTVFSADGDXTTQPKVEKAGGVELK     47
                        ||||||||||||||||||||||||||||||| |||||||||||||||
BSU04960___yd      1 MVVMKKKRILIVSAIVLLFLTVASAVTVFSADGDTTTQPKVEKAGGVELK     50

BSNT_00855        48 VKRFPISRYQANNEASDDLIKGAFVGLTNVTFSFAGNIVRVVDAGMDILY     97
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU04960___yd     51 VKRFPISRYQANNEASDDLIKGAFVGLTNVTFSFAGNIVRVVDTGMDILY    100

BSNT_00855        98 NLQPIDEFANSITNVSKTVYKTLKKNFGEALFIFTCAYVVYLFCVRGSIK    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
BSU04960___yd    101 NLQPIDEFANSITNVSKTVYKTLKKNFGEALFIFTCAYVVYLFCVRGSVK    150

BSNT_00855       148 EAMRRSILFICVMVIGGLWMSNAGYYMKALNALSVEAQGKLLTAGNGLVG    197
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04960___yd    151 EAMRRSILFICVMVIGGLWMSNAGYYMKVLNALSVEAQGKLLTAGNGLVG    200

BSNT_00855       198 IVRDEGNFADSSGIEKGKEMEGTVAVMRNLYFDIALMKPFLIVNFDETSE    247
                     ||:|||||||||.|||||||||||||||||||||||||||||||||||||
BSU04960___yd    201 IVQDEGNFADSSAIEKGKEMEGTVAVMRNLYFDIALMKPFLIVNFDETSE    250

BSNT_00855       248 KKINEKDTDKGGLNRIDKLLSYKLSEDGEKDKKDYIKETEIDEYKNESMT    297
                     |||||:||||||||||||||||||||||||||||||||||||:|||||||
BSU04960___yd    251 KKINEEDTDKGGLNRIDKLLSYKLSEDGEKDKKDYIKETEIDDYKNESMT    300

BSNT_00855       298 SGNVFNQLGESFIAVVASIVIGIPFLALAFFNFLLQVVALVIVFFVPFAF    347
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd    301 SGNVFNQLGESFIAVVASIVIGIPFLALAFFNFLLQVVALVIVFFVPFAF    350

BSNT_00855       348 ILAYVPQLAYSGFVTLGRLGSVYLLKAMLGIIVLFVYVTCFIVDKLIPPN    397
                     ||||||||||||||||||||||||||||||:|||||||||||||||||||
BSU04960___yd    351 ILAYVPQLAYSGFVTLGRLGSVYLLKAMLGVIVLFVYVTCFIVDKLIPPN    400

BSNT_00855       398 GFGMYLLNVAVLASILWIGFHKRDAIIKFVTAGKVVSVDNNMMENMRQNI    447
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd    401 GFGMYLLNVAVLASILWIGFHKRDAIIKFVTAGKVVSVDNNMMENMRQNI    450

BSNT_00855       448 VQPAWEQAKKIGGVWGNGGGVFTDFTKHFGGRKDGSNADGVTGAPSGGGN    497
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd    451 VQPAWEQAKKIGGVWGNGGGVFTDFTKHFGGRKDGSNADGVTGAPSGGGN    500

BSNT_00855       498 SPSGAAMGYDNTHAISRTPQKETANGIASHNSRNLKRNPQTLSKEQEKQK    547
                     ||||.|||||||||||||||||||||||:||||:||||||||||||||||
BSU04960___yd    501 SPSGTAMGYDNTHAISRTPQKETANGIANHNSRSLKRNPQTLSKEQEKQK    550

BSNT_00855       548 QKEAFANAKDNKQQSHLDRLRKDGINSPMLKDALNEGNEDLSKRAPILQD    597
                     |||||||||:|||||||.||||||||||||||||||||||||||||||||
BSU04960___yd    551 QKEAFANAKENKQQSHLARLRKDGINSPMLKDALNEGNEDLSKRAPILQD    600

BSNT_00855       598 KKDESARTDQKEYVEQLLKQPDNQKQTDDASLQLEEETTSNRAPVLQESE    647
                     |||||||||||||||||||||:||:||||||||.|||:||||||||||:|
BSU04960___yd    601 KKDESARTDQKEYVEQLLKQPNNQQQTDDASLQHEEESTSNRAPVLQENE    650

BSNT_00855       648 KETERTDQKAYVHEGQNQNTETEKHHDFEVQKDDSVSKSEPVAQEKTAEI    697
                     |:|||||||||:::.||||.||::..|||||||||||.||||||||||||
BSU04960___yd    651 KDTERTDQKAYIYDEQNQNLETDQQQDFEVQKDDSVSNSEPVAQEKTAEI    700

BSNT_00855       698 KRSDQKVMTNQSEPQLGFESPQSTKVENQSIANNERKIRPSEPAKVHSDG    747
                     ||||||||.||.|||||||||||||||||.||||||||||||||||||||
BSU04960___yd    701 KRSDQKVMMNQPEPQLGFESPQSTKVENQPIANNERKIRPSEPAKVHSDG    750

BSNT_00855       748 IRVEEKQAVAPAESKTVSREKQPSSQNIKRTEQSVNTFDQVSLNEIARRS    797
                     |||:|||||||||:||||||||||||.|||||||||:|||||||||||||
BSU04960___yd    751 IRVDEKQAVAPAENKTVSREKQPSSQTIKRTEQSVNSFDQVSLNEIARRS    800

BSNT_00855       798 SSKVEDRLRRDERKTL    813
                     |||||||||||||.. 
BSU04960___yd    801 SSKVEDRLRRDERTR-    815


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00855 and BSU04960

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
