Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00851 and BSU04930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:17
# Commandline: needle
# -asequence pep-align/BSNT_00851___yddD.1.22522.seq
# -bsequence pep-align/BSU04930___yddD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00851___yddD-BSU04930___yddD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00851___yddD-BSU04930___yddD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00851___yddD
# 2: BSU04930___yddD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 164/174 (94.3%)
# Similarity: 171/174 (98.3%)
# Gaps: 0/174 ( 0.0%)
# Score: 889.0
#
#
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BSNT_00851___ 1 MGRLVFNYRKAMREPKKIQQLTENYSLPFAVELIPAINYFIFVGLCFGFW 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04930___yd 1 MGRLVFNYRKAMREPKKIQQLTENYSLPFAVELIPAINYFIFVGLCFGFW 50
BSNT_00851___ 51 YGVRMIFPHAFDNSFIIVIFGIPIFFTMLVTKIKPEGKNIYLYFIDFAKY 100
||||||||||||||::|||||||.|.|||||||||||||||:||.|||||
BSU04930___yd 51 YGVRMIFPHAFDNSYVIVIFGIPFFLTMLVTKIKPEGKNIYIYFFDFAKY 100
BSNT_00851___ 101 YFFIKLPQKKFCNDRRVDLSNEKQIEFRKLVKVVDYSDETKNAYEGNTQE 150
||||||||||:||||::||||||||||||||||||||:||||||||||||
BSU04930___yd 101 YFFIKLPQKKYCNDRKIDLSNEKQIEFRKLVKVVDYSNETKNAYEGNTQE 150
BSNT_00851___ 151 FAVNKNGRRVGVLPNKKQFDSYAK 174
||||||||||||||||||||||||
BSU04930___yd 151 FAVNKNGRRVGVLPNKKQFDSYAK 174
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