Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00804 and BSU04730

See DNA alignment / Visit BSNT_00804 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence pep-align/BSNT_00804___sigB.1.22522.seq
#    -bsequence pep-align/BSU04730___sigB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00804___sigB-BSU04730___sigB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00804___sigB-BSU04730___sigB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00804___sigB
# 2: BSU04730___sigB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 262
# Identity:     262/262 (100.0%)
# Similarity:   262/262 (100.0%)
# Gaps:           0/262 ( 0.0%)
# Score: 1303.0
# 
#
#=======================================

BSNT_00804___      1 MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04730___si      1 MTQPSKTTKLTKDEVDRLISDYQTKQDEQAQETLVRVYTNLVDMLAKKYS     50

BSNT_00804___     51 KGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04730___si     51 KGKSFHEDLRQVGMIGLLGAIKRYDPVVGKSFEAFAIPTIIGEIKRFLRD    100

BSNT_00804___    101 KTWSVHVPRRIKELGPRIKMAVDQLTTETQRSPKVEEIAEFLDVSEEEVL    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04730___si    101 KTWSVHVPRRIKELGPRIKMAVDQLTTETQRSPKVEEIAEFLDVSEEEVL    150

BSNT_00804___    151 ETMEMGKSYQALSVDHSIEADSDGSTVTILDIVGSQEDGYERVNQQLMLQ    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04730___si    151 ETMEMGKSYQALSVDHSIEADSDGSTVTILDIVGSQEDGYERVNQQLMLQ    200

BSNT_00804___    201 SVLHVLSDREKQIIDLTYIQNKSQKETGDILGISQMHVSRLQRKAVKKLR    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04730___si    201 SVLHVLSDREKQIIDLTYIQNKSQKETGDILGISQMHVSRLQRKAVKKLR    250

BSNT_00804___    251 EALIEDPSMELM    262
                     ||||||||||||
BSU04730___si    251 EALIEDPSMELM    262


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