Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00789 and BSU04600

See DNA alignment / Visit BSNT_00789 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:12
# Commandline: needle
#    -asequence pep-align/BSNT_00789___ydbT.1.22522.seq
#    -bsequence pep-align/BSU04600___ydbT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00789___ydbT-BSU04600___ydbT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00789___ydbT-BSU04600___ydbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00789___ydbT
# 2: BSU04600___ydbT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity:     484/493 (98.2%)
# Similarity:   488/493 (99.0%)
# Gaps:           1/493 ( 0.2%)
# Score: 2448.0
# 
#
#=======================================

BSNT_00789___      1 -MSEPKRLHPAAVILNLCHTIIQTIKNIILPFFFVYIVNSNHTVRFYGAI     49
                      |||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04600___yd      1 MMSEPKRLHPVAVILNLCHTIIQTIKNIILPFFFVYIVNSNHTVRFYGAI     50

BSNT_00789___     50 ALGVLFIWLVAASIIKWRRFTYRIEDDEFRIEEGLFVTKKRYISIDRIQT     99
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04600___yd     51 ALGVLFIWLVAASIIKWRRFTYRIEDDEFRIEEGLFVTKKRYISIDRIQT    100

BSNT_00789___    100 MNTSAGLVQQIFKLVKLQIETAGGGKEAEAVLSAISVEEAERIKEAVFKK    149
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04600___yd    101 MNTSAGLVQQIFKLVKLQIETAGGGKEAEAVLSAISVEEAERIKEAVFKK    150

BSNT_00789___    150 KAQRRENELDEERLEPEEELVPAVEVQEHYRMNAKELLLAASTSGGIGVI    199
                     |||||||||||||||.||||.|:|||||||||||||||:|||||||||||
BSU04600___yd    151 KAQRRENELDEERLEAEEELDPSVEVQEHYRMNAKELLMAASTSGGIGVI    200

BSNT_00789___    200 ISAVFALISQLDEVLPMDWLFDKFSFLQHASIGIYAVLVFIGLFIAWIFS    249
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BSU04600___yd    201 ISAVFALISQLDEVLPMDWLFDKFSFLQHASIGIYAVLIFIGLFIAWIFS    250

BSNT_00789___    250 IAGMMFRYANFQIIKKEQELVISRGIIEKHQVTIPLRKIQAIKIKENIIR    299
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04600___yd    251 IAGMMFRYANFQIIKKEQELVISRGIIEKHQVTIPLRKIQAIKIKENIIR    300

BSNT_00789___    300 QLFGFVTVSIVSAGGGDREKEEGALTILFPMIHKKKLPYMLRTFTPEYTL    349
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BSU04600___yd    301 QLFGFVTVSIVSAGGGDREKEEGALTILFPMIHKKKLPHMLRTFTPEYTL    350

BSNT_00789___    350 EENCRRLPRRALKRYLFRSVIFSLFLIIPLCIFFQPWGYLSVILLPIELL    399
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04600___yd    351 EENCRRLPRRALKRYLFRSVIFSLFLIIPLCIFFQPWGYLSVILLPIELL    400

BSNT_00789___    400 FGYLAYKEAAWTINGDRLQLTSRFIGRTTAIVLKKRMQVCKFSQSYFQKK    449
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04600___yd    401 FGYLAYKEAAWTINGDRLQLTSRFIGRTTAIVLKKRMQVCKFSQSYFQKK    450

BSNT_00789___    450 GRLYTISTSVKSSSHMEELTVRDVGEEDAAFILNWYSYEKADG    492
                     |||||||||||||||||||||||||||||||||.|||||||||
BSU04600___yd    451 GRLYTISTSVKSSSHMEELTVRDVGEEDAAFILKWYSYEKADG    493


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.