Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00778 and BSU04530

See DNA alignment / Visit BSNT_00778 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence pep-align/BSNT_00778.1.22522.seq
#    -bsequence pep-align/BSU04530___ydbN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00778-BSU04530___ydbN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00778-BSU04530___ydbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00778
# 2: BSU04530___ydbN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      48/59 (81.4%)
# Similarity:    48/59 (81.4%)
# Gaps:          11/59 (18.6%)
# Score: 250.0
# 
#
#=======================================

BSNT_00778         1 -----------MPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQ     39
                                |||||||||||||||||||||||||||||||||||||||
BSU04530___yd      1 MNTNMSGGRRSMPKRKVKTYQQLIQENKEAIMGNPKLMNVIYDRIDRKHQ     50

BSNT_00778        40 KNLQEQNNT     48
                     |||||||||
BSU04530___yd     51 KNLQEQNNT     59


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.