Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00687 and BSU03910

See DNA alignment / Visit BSNT_00687 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:00
# Commandline: needle
#    -asequence pep-align/BSNT_00687___gabD.1.22522.seq
#    -bsequence pep-align/BSU03910___gabD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00687___gabD-BSU03910___gabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00687___gabD-BSU03910___gabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00687___gabD
# 2: BSU03910___gabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity:     459/462 (99.4%)
# Similarity:   460/462 (99.6%)
# Gaps:           0/462 ( 0.0%)
# Score: 2379.0
# 
#
#=======================================

BSNT_00687___      1 MPDQLTVYNPATGEEIKTIPQQSAKEVEEAIERSHQAFKTWSKTSANERA     50
                     ||||||||||||||||||||||||.||||||||||||||||||||||||.
BSU03910___ga      1 MPDQLTVYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERT     50

BSNT_00687___     51 SLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga     51 SLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEA    100

BSNT_00687___    101 KRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    101 KRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAA    150

BSNT_00687___    151 GCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSS    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    151 GCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSS    200

BSNT_00687___    201 PKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    201 PKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA    250

BSNT_00687___    251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLRVGNGLE    300
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BSU03910___ga    251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGLE    300

BSNT_00687___    301 EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNP    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    301 EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNP    350

BSNT_00687___    351 TVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    351 TVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT    400

BSNT_00687___    401 ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIE    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03910___ga    401 ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIE    450

BSNT_00687___    451 PYLETKYLSIGL    462
                     ||||||||||||
BSU03910___ga    451 PYLETKYLSIGL    462


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.