Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00503 and BSU02840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:39
# Commandline: needle
# -asequence pep-align/BSNT_00503.1.22522.seq
# -bsequence pep-align/BSU02840___ycdG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00503-BSU02840___ycdG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00503-BSU02840___ycdG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00503
# 2: BSU02840___ycdG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity: 316/561 (56.3%)
# Similarity: 324/561 (57.8%)
# Gaps: 203/561 (36.2%)
# Score: 1719.5
#
#
#=======================================
BSNT_00503 1 MKTDWWKDAVVYQIYPRSFQDSDGDGIGDLRGIISRLDYIKELGADVIWI 50
||||||||||||||||||||||:|||||||||||||||||||||||||||
BSU02840___yc 1 MKTDWWKDAVVYQIYPRSFQDSNGDGIGDLRGIISRLDYIKELGADVIWI 50
BSNT_00503 51 CPIYPSPNVDYGYDVTNHKAIMDSYGTMDDFHELLDQVHQRGLKLVMDFV 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02840___yc 51 CPIYPSPNVDYGYDVTNHKAIMDSYGTMDDFHELLDQVHQRGLKLVMDFV 100
BSNT_00503 101 LNHTSVEHPWFKEAELDKNSKYRSYYYWRPGTKNGPPTDWLSNYGCPVWQ 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02840___yc 101 LNHTSVEHPWFKEAELDKNSKYRSYYYWRPGTKNGPPTDWLSNYGCPVWQ 150
BSNT_00503 151 YEEHTGEYYLHMNAVKQADLNWENPEVRQAVYDMMKFWLDKGVDGLRIDQ 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02840___yc 151 YEEHTGEYYLHMNAVKQADLNWENPEVRQAVYDMMKFWLDKGVDGLRIDQ 200
BSNT_00503 201 LHLISKKEYLPSYEDYINQQAEPKPFQPNGEQIHDYLKEMTDEVFSQYDV 250
|||||||||||||||||||||||||||||||:|||||||:||||||.|||
BSU02840___yc 201 LHLISKKEYLPSYEDYINQQAEPKPFQPNGERIHDYLKEITDEVFSHYDV 250
BSNT_00503 251 MSVGEVGSVTPEEGLKFTGTDKHELNMIFHFQHMELDQQPGKEHWDLKPL 300
||||||||||||||||:|||||||||||||||||||||||||||||||||
BSU02840___yc 251 MSVGEVGSVTPEEGLKYTGTDKHELNMIFHFQHMELDQQPGKEHWDLKPL 300
BSNT_00503 301 ELSDLKSVLTKWQRSLNIKAGIHCFGATTTSPGLCPDSETMGNTAKHQRK 350
|||||||||||||:.|..:.....|......|.:.......|...|...|
BSU02840___yc 301 ELSDLKSVLTKWQKKLEHQGWNTLFWCNHDQPRIVSRFGDDGEYRKASAK 350
BSNT_00503 351 CWQP--YFIL---------------------------------------- 358
.... ||:.
BSU02840___yc 351 MLAAVIYFMKGTPYIYQGEEIGMTNAPFTRIEDYKDIQTINMYHKRVFEK 400
BSNT_00503 358 -------------------------------------------------- 358
BSU02840___yc 401 GYDPNDVMRSILAKSRDHARTPMQWNSGKNAGFTDGTPWLKVNPNFTAIN 450
BSNT_00503 358 -------------------------------------------------- 358
BSU02840___yc 451 VEEAQGDPDSVLNYYKKLISLRKQYADLMKGSFDLLLPDDPQLFVYMREN 500
BSNT_00503 358 -------------------------------------------------- 358
BSU02840___yc 501 SKQQLLSVNNFSKEQAVFQWPKNCGKAQASLLLSNYNNDDLDDEMVFRPY 550
BSNT_00503 358 ----------- 358
BSU02840___yc 551 ESRVYLLDKTN 561
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