Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00488 and BSU02750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:37
# Commandline: needle
# -asequence pep-align/BSNT_00488.1.22522.seq
# -bsequence pep-align/BSU02750___natA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00488-BSU02750___natA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00488-BSU02750___natA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00488
# 2: BSU02750___natA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 111/246 (45.1%)
# Similarity: 112/246 (45.5%)
# Gaps: 134/246 (54.5%)
# Score: 554.0
#
#
#=======================================
BSNT_00488 0 -------------------------------------------------- 0
BSU02750___na 1 MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRM 50
BSNT_00488 0 -------------------------------------------------- 0
BSU02750___na 51 IASLLEPSQGVITVDGFDTVKQPAEVKQRIGVLFGGETGLYDRMTAKENL 100
BSNT_00488 1 ----------------------------------MGGFSKGMRQKVAIAR 16
:|||||||||||||||
BSU02750___na 101 QYFGRLYGLNRHEIKARIEDLSKRFGMRDYMNRRVGGFSKGMRQKVAIAR 150
BSNT_00488 17 ALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKREQKTILFSSHIMEEV 66
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02750___na 151 ALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKREQKTILFSSHIMEEV 200
BSNT_00488 67 QALCDSVIMIHSGEVIYRGALESLYESERSEDLNYIFMSKLVRGIS 112
||||||||||||||||||||||||||||||||||||||||||||||
BSU02750___na 201 QALCDSVIMIHSGEVIYRGALESLYESERSEDLNYIFMSKLVRGIS 246
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