Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00462 and BSU02610

See DNA alignment / Visit BSNT_00462 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:35
# Commandline: needle
#    -asequence pep-align/BSNT_00462___ycbR.1.22522.seq
#    -bsequence pep-align/BSU02610___ycbR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00462___ycbR-BSU02610___ycbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00462___ycbR-BSU02610___ycbR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00462___ycbR
# 2: BSU02610___ycbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     241/243 (99.2%)
# Similarity:   241/243 (99.2%)
# Gaps:           0/243 ( 0.0%)
# Score: 1248.0
# 
#
#=======================================

BSNT_00462___      1 MATIDLQKKSVKIVLEKKQLTKVTARVGLVLDITGSMRPLYKNGTVQNVV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02610___yc      1 MATIDLQKKSVKIVLEKKQLTKVTARVGLVLDITGSMRPLYKNGTVQNVV     50

BSNT_00462___     51 ERILAVADQFDDNGLLDVWVYDNEFSRLKPVSEKDFSGYVDREILNNDRL    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02610___yc     51 ERILAVADQFDDNGLLDVWVYDNEFSRLKPVSEKDFSGYVDREILNNDRL    100

BSNT_00462___    101 HKFGRNDEPPVMKDVLRKYVAEEPSSYPAFIVFINDGGCKKSIKPIIEAS    150
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU02610___yc    101 HKFGRNDEPPVMKDVLRKYVTEEPSSYPAFIVFINDGGCKKSIKPIIEAS    150

BSNT_00462___    151 SDKSVFWQFVGIGNGNFDFLNKLDTLEGRVIDNTNFLHIEEIDRISDDEL    200
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU02610___yc    151 SDKPVFWQFVGIGNGNFDFLNKLDTLEGRVIDNTNFLHIEEIDRISDDEL    200

BSNT_00462___    201 YDALLAEFPFWLKEAKEKGIVREQEPPAEKPKKKGFFSRLFSK    243
                     |||||||||||||||||||||||||||||||||||||||||||
BSU02610___yc    201 YDALLAEFPFWLKEAKEKGIVREQEPPAEKPKKKGFFSRLFSK    243


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