Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00436 and BSU02460

See DNA alignment / Visit BSNT_00436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:32
# Commandline: needle
#    -asequence pep-align/BSNT_00436___ycbC.1.22522.seq
#    -bsequence pep-align/BSU02460___ycbC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00436___ycbC-BSU02460___ycbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00436___ycbC-BSU02460___ycbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00436___ycbC
# 2: BSU02460___ycbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     308/308 (100.0%)
# Similarity:   308/308 (100.0%)
# Gaps:           0/308 ( 0.0%)
# Score: 1581.0
# 
#
#=======================================

BSNT_00436___      1 MSRIRKAPAGILGFPVAPFNTQGKLEEEALFQNIEFLLNEGLEAIFIACG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc      1 MSRIRKAPAGILGFPVAPFNTQGKLEEEALFQNIEFLLNEGLEAIFIACG     50

BSNT_00436___     51 SGEFQSLSQKEYEQMVEVAVSAAGGKVPVYTGVGGNLSTALDWAQLSEKK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc     51 SGEFQSLSQKEYEQMVEVAVSAAGGKVPVYTGVGGNLSTALDWAQLSEKK    100

BSNT_00436___    101 GADGYLILPPYLVHGEQEGLYQYAKTIIESTDLNAILYQRDNAVLSVEQI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    101 GADGYLILPPYLVHGEQEGLYQYAKTIIESTDLNAILYQRDNAVLSVEQI    150

BSNT_00436___    151 KRLTECEQLVGVKDGVGNMDLNINLVYTIGDRLGWLNGMPMAEVTMPAYL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    151 KRLTECEQLVGVKDGVGNMDLNINLVYTIGDRLGWLNGMPMAEVTMPAYL    200

BSNT_00436___    201 PIGFHSYSSAISNYIPHISRMFYDALKNGNDELVKELYRHVILPINDIRK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    201 PIGFHSYSSAISNYIPHISRMFYDALKNGNDELVKELYRHVILPINDIRK    250

BSNT_00436___    251 QRKGYAVSLIKAGMEIMGLNVRNTARPPVGPVEKDHYQQLEAILKQAADR    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    251 QRKGYAVSLIKAGMEIMGLNVRNTARPPVGPVEKDHYQQLEAILKQAADR    300

BSNT_00436___    301 FPKKAATV    308
                     ||||||||
BSU02460___yc    301 FPKKAATV    308


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