Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00406 and BSU02260

See DNA alignment / Visit BSNT_00406 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:29
# Commandline: needle
#    -asequence pep-align/BSNT_00406___ybfK.1.22522.seq
#    -bsequence pep-align/BSU02260___ybfK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00406___ybfK-BSU02260___ybfK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00406___ybfK-BSU02260___ybfK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00406___ybfK
# 2: BSU02260___ybfK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     290/296 (98.0%)
# Similarity:   293/296 (99.0%)
# Gaps:           0/296 ( 0.0%)
# Score: 1506.0
# 
#
#=======================================

BSNT_00406___      1 MIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFGKTHIIASG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02260___yb      1 MIQDSMQFAAVESGLRFYQAYDQSLSLWPIESEAFYVSTRFGKTHIIASG     50

BSNT_00406___     51 PKDAPSLILLHGGLFSSAMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSSA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
BSU02260___yb     51 PKDAPSLILLHGGLFSSAMWYPNIAAWSSQFRTYAVDIIGDKNKSIPSAA    100

BSNT_00406___    101 METRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02260___yb    101 METRADFAEWMKDVFDSLGLETAHLAGLSLGGSHIVNFLLRAPERVERAV    150

BSNT_00406___    151 VMSPAEAFISFHPDVYKYVAELTGARGAESYIKWITGNSYDLHPLLQRQI    200
                     |:||||||||||||||||.||||||||||||||||||:||||||||||||
BSU02260___yb    151 VISPAEAFISFHPDVYKYAAELTGARGAESYIKWITGDSYDLHPLLQRQI    200

BSNT_00406___    201 VAGVEWQDELRSLKPTENGFPYVFTDQELKSIQVPVLLMFGEHEVMYHQQ    250
                     |||||||||.||||||||||||||||||||||||||||||||||.|||||
BSU02260___yb    201 VAGVEWQDEQRSLKPTENGFPYVFTDQELKSIQVPVLLMFGEHEAMYHQQ    250

BSNT_00406___    251 MAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGGIK    296
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU02260___yb    251 MAFERASVLVPGIQAEIVKNAGHLLSLEQPEYVNQRVLSFLCGGIK    296


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