Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00362 and BSU02030

See DNA alignment / Visit BSNT_00362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:24
# Commandline: needle
#    -asequence pep-align/BSNT_00362___ybdM.1.22522.seq
#    -bsequence pep-align/BSU02030___ybdM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00362___ybdM-BSU02030___ybdM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00362___ybdM-BSU02030___ybdM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00362___ybdM
# 2: BSU02030___ybdM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:     252/256 (98.4%)
# Similarity:   254/256 (99.2%)
# Gaps:           0/256 ( 0.0%)
# Score: 1296.0
# 
#
#=======================================

BSNT_00362___      1 MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILTQTP     50
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU02030___yb      1 MALKLLKKLLFDRPLKNGVILNHQYKIEECLGMGGYGLVYLCTDILAQTP     50

BSNT_00362___     51 YVLKQLRPTKAKKEKEKVRFQQEIKLLNSIHHPQIPGFIDEFIIDGQAYY    100
                     |||||||||||||||||||||||||||.:|||||||||||||||||||||
BSU02030___yb     51 YVLKQLRPTKAKKEKEKVRFQQEIKLLKNIHHPQIPGFIDEFIIDGQAYY    100

BSNT_00362___    101 VMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDI    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    101 VMQFIEGENIEELLFFRKQPFTELMALQLISQLLEIIEYLHDRLIFHSDI    150

BSNT_00362___    151 RTPNIIINDGRLCLLDFGLAKQLTPEEMEEIKVRKQDDFFDLGETLLFLL    200
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BSU02030___yb    151 RTPNIIINDGRLCLIDFGLAKQLTPEEMEEIKVRKQDDFFDLGETLLFLL    200

BSNT_00362___    201 YSQYKGKKKKNGTWLEELTLTKEVTLLLKRLLGIEEEYQHTASIREDLNR    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    201 YSQYKGKKKKNGTWLEELTLTKEVTLLLKRLLGIEEEYQHTASIREDLNR    250

BSNT_00362___    251 AIQSVT    256
                     ||||||
BSU02030___yb    251 AIQSVT    256


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.