Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00254 and BSU01490

See DNA alignment / Visit BSNT_00254 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:17
# Commandline: needle
#    -asequence pep-align/BSNT_00254___rplM.1.22522.seq
#    -bsequence pep-align/BSU01490___rplM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00254___rplM-BSU01490___rplM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00254___rplM-BSU01490___rplM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00254___rplM
# 2: BSU01490___rplM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:     145/145 (100.0%)
# Similarity:   145/145 (100.0%)
# Gaps:           0/145 ( 0.0%)
# Score: 756.0
# 
#
#=======================================

BSNT_00254___      1 MRTTPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01490___rp      1 MRTTPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVD     50

BSNT_00254___     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01490___rp     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEK    100

BSNT_00254___    101 MLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG    145
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU01490___rp    101 MLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG    145


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.