Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00251 and BSU01460

See DNA alignment / Visit BSNT_00251 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:16
# Commandline: needle
#    -asequence pep-align/BSNT_00251___ybaE.1.22522.seq
#    -bsequence pep-align/BSU01460___ybaE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00251___ybaE-BSU01460___ybaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00251___ybaE-BSU01460___ybaE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00251___ybaE
# 2: BSU01460___ybaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     275/276 (99.6%)
# Similarity:   275/276 (99.6%)
# Gaps:           0/276 ( 0.0%)
# Score: 1391.0
# 
#
#=======================================

BSNT_00251___      1 MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQ     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01460___yb      1 MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQ     50

BSNT_00251___     51 ISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMN    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01460___yb     51 ISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMN    100

BSNT_00251___    101 FGVKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMD    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01460___yb    101 FGVKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMD    150

BSNT_00251___    151 PEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01460___yb    151 PEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYA    200

BSNT_00251___    201 DEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAVLGV    250
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU01460___yb    201 DEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGV    250

BSNT_00251___    251 RFNEPMLTIEDAAAEIRALFQGEKTL    276
                     ||||||||||||||||||||||||||
BSU01460___yb    251 RFNEPMLTIEDAAAEIRALFQGEKTL    276


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.