Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00246 and BSU01410

See DNA alignment / Visit BSNT_00246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:16
# Commandline: needle
#    -asequence pep-align/BSNT_00246___rpsM.1.22522.seq
#    -bsequence pep-align/BSU01410___rpsM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00246___rpsM-BSU01410___rpsM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00246___rpsM-BSU01410___rpsM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: BSU01410___rpsM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:     121/121 (100.0%)
# Similarity:   121/121 (100.0%)
# Gaps:           0/121 ( 0.0%)
# Score: 600.0
# 
#
#=======================================

BSNT_00246___      1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01410___rp      1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTE     50

BSNT_00246___     51 EELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01410___rp     51 EELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQ    100

BSNT_00246___    101 NSKNNARTRKGPRRTVANKKK    121
                     |||||||||||||||||||||
BSU01410___rp    101 NSKNNARTRKGPRRTVANKKK    121


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.