Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00238 and BSU01340

See DNA alignment / Visit BSNT_00238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:15
# Commandline: needle
#    -asequence pep-align/BSNT_00238___rpmD.1.22522.seq
#    -bsequence pep-align/BSU01340___rpmD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00238___rpmD-BSU01340___rpmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00238___rpmD-BSU01340___rpmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00238___rpmD
# 2: BSU01340___rpmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      59/59 (100.0%)
# Similarity:    59/59 (100.0%)
# Gaps:           0/59 ( 0.0%)
# Score: 288.0
# 
#
#=======================================

BSNT_00238___      1 MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01340___rp      1 MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKV     50

BSNT_00238___     51 SHLVSVKEQ     59
                     |||||||||
BSU01340___rp     51 SHLVSVKEQ     59


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