Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00237 and BSU01330

See DNA alignment / Visit BSNT_00237 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:15
# Commandline: needle
#    -asequence pep-align/BSNT_00237___rpsE.1.22522.seq
#    -bsequence pep-align/BSU01330___rpsE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00237___rpsE-BSU01330___rpsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00237___rpsE-BSU01330___rpsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00237___rpsE
# 2: BSU01330___rpsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     166/168 (98.8%)
# Similarity:   166/168 (98.8%)
# Gaps:           2/168 ( 1.2%)
# Score: 815.0
# 
#
#=======================================

BSNT_00237___      1 MIMRRIDPSKLELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGF     50
                       ||||||||||||||||||||||||||||||||||||||||||||||||
BSU01330___rp      1 --MRRIDPSKLELEERLVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGF     48

BSNT_00237___     51 GTGKAQEVPEAIRKAVEDAKKNLIEVPMVGTTIPHEIIGRFGAGNILLKP    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01330___rp     49 GTGKAQEVPEAIRKAVEDAKKNLIEVPMVGTTIPHEIIGRFGAGNILLKP     98

BSNT_00237___    101 ASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01330___rp     99 ASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELK    148

BSNT_00237___    151 RAEDVAKLRGKSVEELLG    168
                     ||||||||||||||||||
BSU01330___rp    149 RAEDVAKLRGKSVEELLG    166


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