Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00208 and BSU01070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:09
# Commandline: needle
# -asequence pep-align/BSNT_00208___rpoB.1.22522.seq
# -bsequence pep-align/BSU01070___rpoB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00208___rpoB-BSU01070___rpoB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00208___rpoB-BSU01070___rpoB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00208___rpoB
# 2: BSU01070___rpoB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1193
# Identity: 1146/1193 (96.1%)
# Similarity: 1146/1193 (96.1%)
# Gaps: 47/1193 ( 3.9%)
# Score: 5887.0
#
#
#=======================================
BSNT_00208___ 1 -----------------------------------------------MFQ 3
|||
BSU01070___rp 1 MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQ 50
BSNT_00208___ 4 DISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLIN 53
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 51 DISPIEDFTGNLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLIN 100
BSNT_00208___ 54 KETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKV 103
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 101 KETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSPSVYFSGKV 150
BSNT_00208___ 104 DKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALG 153
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 151 DKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALG 200
BSNT_00208___ 154 FGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVEN 203
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 201 FGSDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVEN 250
BSNT_00208___ 204 AKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG 253
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 251 AKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG 300
BSNT_00208___ 254 EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIF 303
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 301 EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIF 350
BSNT_00208___ 304 APTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDD 353
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 351 APTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDD 400
BSNT_00208___ 354 IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLIN 403
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 401 IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNTITPQQLIN 450
BSNT_00208___ 404 IRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAG 453
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 451 IRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAG 500
BSNT_00208___ 454 MEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRV 503
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 501 MEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRV 550
BSNT_00208___ 504 DPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN 553
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 551 DPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN 600
BSNT_00208___ 554 TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPL 603
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 601 TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPL 650
BSNT_00208___ 604 MQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDG 653
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 651 MQPEAPFVGTGMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDG 700
BSNT_00208___ 654 QKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPSMEL 703
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 701 QKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEILADGPSMEL 750
BSNT_00208___ 704 GELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEAR 753
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 751 GELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEAR 800
BSNT_00208___ 754 DTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKG 803
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 801 DTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKG 850
BSNT_00208___ 804 VTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE 853
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 851 VTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE 900
BSNT_00208___ 854 LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDG 903
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 901 LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDG 950
BSNT_00208___ 904 TPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDV 953
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 951 TPIDIMLNPLGVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDV 1000
BSNT_00208___ 954 WETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHA 1003
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 1001 WETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAHMVDDKLHA 1050
BSNT_00208___ 1004 RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKS 1053
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 1051 RSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKS 1100
BSNT_00208___ 1054 DDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEE 1103
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 1101 DDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEE 1150
BSNT_00208___ 1104 EIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE 1146
|||||||||||||||||||||||||||||||||||||||||||
BSU01070___rp 1151 EIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE 1193
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